PFAM Alignment for "Favorite" Cys-proteases

CATK_HUMAN/115-328  APDS..VDYRKKG....YVTPVKNQG.QCGSCWAFSSVGALEGQLKKKTG...KLLNLSPQNLVDCVSE....N........DGCGGGYMTNAFQYVQK....NRG.IDSEDA..YPYVGQEES........................CMYNPT.......GKAAKCRGYREIPE...GNEKALKRAVARVG.PVSVAID.ASLTS.FQFYSKG.VYYDESCNS.....DNLNHAVLAVGYGIQK...................GNKHWIIKNSWGENWGNKGYILMARNKN...NACGIANLASFPK
CATL_CHICK/1-217    APRS..VDWREKG....YVTPVKDQG.QCGSCWAFSTTGALEGQHFRTKG...KLVSLSEQNLVDCSRP..EGN........QGCNGGLMDQAFQYVQD....NGG.IDSEES..YPYTAKDDED.......................CRYKAE.......YNAANDTGFVDIPQ...GHERALMKAVASVG.PVSVAID.AGHSS.FQFYQSG.IYYEPDCSS.....EDLDHGVLVVGYGFEG...................GKKYWIVKNSWGEKWGDKGYIYMAKDRK...NHCGIATAASYPL
CATL_HUMAN/114-332  APRS..VDWREKG....YVTPVKNQG.QCGSCWAFSATGALEGQMFRKTG...RLISLSEQNLVDCSGP..QGN........EGCNGGLMDYAFQYVQD....NGG.LDSEES..YPYEATEES........................CKYNPK.......YSVANDTGFVDIP....KQEKALMKAVATVG.PISVAID.AGHES.FLFYKEG.IYFEPDCSS.....EDMDHGVLVVGYGFESte...............sdNNKYWLVKNSWGEEWGMGGYVKMAKDR...RNHCGIASAASYPT
CATL_MOUSE/114-332  IPKS..VDWREKG....CVTPVKNQG.QCGSCWAFSASGCLEGQMFLKTG...KLISLSEQNLVDCSHA..QGN........QGCNGGLMDFAFQYIKE....NGG.LDSEES..YPYEAKDGS........................CKYRAE.......FAVANDTGFVDIP....QQEKALMKAVATVG.PISVAMD.ASHPS.LQFYSSG.IYYEPNCSS.....KNLDHGVLLVGYGYEGtd...............snKNKYWLVKNSWGSEWGMEGYIKIAKDRD...NHCGLATAASYPV
CATS_BOVIN/1-216    LPDS..MDWREKG....CVTEVKYQG.ACGSCWAFSAVGALEAQVKLKTG...KLVSLSAQNLVDCSTA..KYG.......NKGCNGGFMTEAFQYIID....NNG.IDSEAS..YPYKAMDGK........................CQYDVK.......NRAATCSRYIELPF...GSEEALKEAVANKG.PVSVGID.ASHSS.FFLYKTG.VYYDPSCT......QNVNHGVLVVGYGNLD...................GKDYWLVKNSWGLHFGDQGYIRMARNSG...NHCGIANYPSYPE
CYSL_LYCES/18-233   LPES..IDWREKG....VLVGVKDQG.SCGSCWAFSAVAAMESINAIVTG...NLISLSEQELVDCDRS...YN........EGCDGGLMDYAFEFVIK....NGG.IDTEED..YPYKERNGV........................CDQYRK......NAKVVKIDSYEDVPV...NNEKALQKAVAHQ..PVSIALE.AGGRD.FQHYKSG.IFTGKCG.......TAVDHGVVIAGYGTEN...................GMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV
CYSP_PLAFA/333-496  VPEI..LDYREKG....IVHEPKDQG.LCGSCWAFASVGNIESVFAKKNK...NILSFSEQEVVDCSKD....N........FGCDGGHPFYSFLYVLQ....NE..LCLGDE..YKYKAKDDM........................FCLNYR......CKRKVSLSSIGAV......KENQLILALNEVG.PLSVNVG.VNND..FVAYSEG.VYNGTCS.......EELNHSVLLVGYG..................................................................
CYSP_PLAVI/339-503  VPEI..LDYREKG....IVHEPKDQG.LCGSCWAFASVGNVECMYAKEHN..KTILTLSEQEVVDCSKL....N........FGCDGGHPFYSFIYAIE....NG..ICMGDD..YKYKAMDNL........................FCLNYR......CKNKVTLSSVGGV......KENELIRALNEVG.PVSVNVG.VTDD..FSFYGGG.IFNGTCT.......EELNHSVLLVGYG..................................................................
CYSP_PLAVN/263-427  FPDS..RDYRSKF....NFLPPKDQG.NCGSCWAFAAIGNFEYLYVHTRH..EMPISFSEQQMVDCSTE....N........YGCDGGNPFYAFLYMIN....NG..VCLGDE..YPYKGHEDF........................FCLNYR......CSLLGRVHFIGDV......KPNELIMALNYVG.PVTIAVG.ASED..FVLYSGG.VFDGECN.......PELNHSVLLVGYG..................................................................
CYSP_THEAN/227-437  TGEN..LNWARTD....AVSPTKDQGdHCGSCWAFSSIASVESLYRLYKN...KSYFLSEQELVNCDKS....S........MGCAGGLPITALEYIHS....KG..VSFESE..VPYTGIVSP........................CKPSIK........NKVFIDSISIL.....KGNDVVNKSLVIS..PTVVGIA.VTKE..LKLYSGG.IFTGKCG.......GELNHAVLLVGEGVDHe.................tGMRYWIIKNSWGEDWGENGFLRLQRTK.KGLDKCGILTFGLNPI
CYSP_TRYCR/123-335  APAA..VDWRARG....AVTAVKDQG.QCGSCWAFSAIGNVECQWFLAGH...PLTNLSEQMLVSCDKT............DSGCSGGLMNNAFEWIVQE..NNGA.VYTEDS..YPYASGEGIS.....................PPCTTSGH.......TVGATITGHVELP....QDEAQIAAWLAVNG.PVAVAVD.ASSW...MTYTGG.VMTSCVS.......EQLDHGVLLVGYN.DSa..................AVPYWIIKNSWTTQWGEEGYIRIAKGS....NQCLVKEEASSAV
CYSP_VIGMU/128-344  VPAS..VDWRKKG....AVTDVKDQG.QCGSCWAFSTIVAVEGINQIKTN...KLVSLSEQELVDCDKE..E.N........QGCNGGLMESAFEFIKQ....KGG.ITTESN..YPYTAQEGT........................CDESKV......NDLAVSIDGHENVPV...NDENALLKAVANQ..PVSVAID.AGGSD.FQFYSEG.VFTGDCN.......TDLNHGVAIVGYGTTVd..................GTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI
ORYB_ORYSA/140-356  LPES..VDWREKG....AVAPVKNQG.QCGSCWAFSAVSTVESINQLVTG...EMITLSEQELVECSTN..GQN........SGCNGGLMADAFDFIIK....NGG.IDTEDD..YPYKAVDGK........................CDINRE......NAKVVSIDGFEDVPQ...NDEKSLQKAVAHQ..PVSVAIE.AGGRE.FQLYHSG.VFSGRCG.......TSLDHGVVAVGYGTDN...................GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPT
PAP2_CARPA/1-214    YPQS..IDWRAKG....AVTPVKNQG.ACGSCWAFSTIATVEGINKIVTG...NLLELSEQELVDCDKH....S........YGCKGGYQTTSLQYVAN....NG..VHTSKV..YPYQAKQYK........................CRATDK......PGPKVKITGYKRVPS...NCETSFLGALANQ..PLSVLVE.AGGKP.FQLYKSG.VFDGPCG.......TKLDHAVTAVGYGTSD...................GKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPF
PAP4_CARPA/133-346  LPES..VDWRAKG....AVTPVKHQG.YCESCWAFSTVATVEGINKIKTG...NLVELSEQELVDCDKQ....S........YGCNRGYQSTSLQYVAQ....NG..IHLRAK..YPYIAKQQT........................CRANQV......GGPKVKTNGVGRVQS...NNEGSLLNAIAHQ..PVSVVVE.SAGRD.FQNYKGG.IFEGSCG.......TKVDHAVTAVGYGKSG...................GKGYILIKNSWGPGWGENGYIRIRRASGNSPGVCGVYRSSYYPI
PAPA_CARPA/134-343  IPEY..VDWRQKG....AVTPVKNQG.SCGSCWAFSAVVTIEGIIKIRTG...NLNEYSEQELLDCDRR....S........YGCNGGYPWSALQLVAQ....YG..IHYRNT..YPYEGVQRY........................CRSREK......GPYAAKTDGVRQVQP...YNEGALLYSIANQ..PVSVVLE.AAGKD.FQLYRGG.IFVGPCG.......NKVDHAVAAVGYG.......................PNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV