Local Copy
TreeAlign on Complete Sequences
ALIGNMENT OF SEQUENCES:
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LKKA-K---------------------------------------------------------------- 5 9
SYPY-A---------------------------------------------------------------- 5 10
DYPY-K---------------------------------------------------------------- 5 12
KKHL-A---------------------------------------------------------------- 5 8
ENHL-K---------------------------------------------------------------- 5 6
SSMN-N---------------------------------------------------------------- 5 7
LSKN-K---------------------------------------------------------------- 5 5
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---------------------------------------------------------------------- 0 2
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---------------------------------------------------------------------- 0 13
---------------------------------------------------------------------- 0 4
---------------------------------------------------------------------- 0 1
HNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNY----TTTE 66 15
HNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPEDY----TNQP 66 14
HTVS-RSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQH 69 11
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-G-IEEI----KDLS---------LITGENL---NWARTDAVSPTKDQGDHCGSCWAFSSIASVESLY-R 56 9
-S-GEGISPPCTTSG---------HTVGATI---TGHVELPQDEAQIAAW-LAVNGPVAVAVDASS--WM 58 10
-A-VDGKCD--INRE---------NAKVVSI---DGFEDVPQNDEKSLQK-AVAHQPVSVAIEAGGREFQ 58 12
-N-TNLISV--DNKS---------KDFPDSR---DYRSKFNFLPPKDQGN-CGSCWAFAAIGNFEYLYVH 58 8
-D-NILISE--FYTNGKRNEKDIFSKVPEIL---DYREKGIVHEPKDQGL-CGSCWAFASVGNIESVFAK 67 6
-G-KGKNVV--TSSSG----ANLLADVPEIL---DYREKGIVHEPKDQGL-CGSCWAFASVGNVECMYAK 63 7
-S-DRYL----PKVG---------DSLPESI---DWREKGVLVGVKDQGS-CGSCWAFSAVAAMESIN-A 55 5
--------------------------MWGLK---VLLLPVVSFALYPEEI-LDTHWELWKKTHRKQYN-N 39 0
--------------------------MNPTLILAAFCLGIASATLTFDHS-LEAQWTKWKAMHNRLYG-M 42 2
--------------------------MNLLLLLAVLCLGTALATPKFDQT-FSAEWHQWKSTHRRLYG-T 42 3
--------------------------YPQSI---DWRAKGAVTPVKNQGA-CGSCWAFSTIATVEGIN-K 39 13
--------------------------LPDSM---DWREKGCVTEVKYQGA-CGSCWAFSAVGALEAQV-K 39 4
--------------------------APRSV---DWREKGYVTPVKDQGQ-CGSCWAFSTTGALEGQH-F 39 1
LSYEEVL----NDGD---------VNIPEYV---DWRQKGAVTPVKNQGS-CGSCWAFSAVVTIEGII-K 118 15
YD-EEFV----NEDI---------VDLPESV---DWRAKGAVTPVKHQGY-CESCWAFSTVATVEGIN-K 117 14
GS-GTFM----YEKV---------GSVPASV---DWRKKGAVTDVKDQGQ-CGSCWAFSTIVAVEGIN-Q 120 11
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LYKN-KSYFLSEQELVNCDK-S----SMGCAGGLPITALEYIHSKGV-------SFESEVPYTGIVSP-C 112 9
TYTG-GVMTSCVSEQLDHGV-L----LVGYNDSAAV-PYWIIKNSWT-------TQWGEEGYIRIAKG-S 113 10
LYHS-GVFSGRCGTSLDHGV-V----AVGYGTDNGK-DYWIVRNSWG-------PKWGESGYVRMERN-I 113 12
TRHE-MPISFSEQQMVDCST-E----NYGCDGGNPFYAFLYMINNGV-CLGDEYPYKGHEDFFCLNYR-C 120 8
K-NK-NILSFSEQEVVDCSK-D----NFGCDGGHPFYSFLYVLQNEL-CLGDEYKYKAKDDMFCLNYR-C 128 6
EHNK-TILTLSEQEVVDCSK-L----NFGCDGGHPFYSFIYAIENGI-CMGDDYKYKAMDNLFCLNYR-C 125 7
IVTG-NLISLSEQELVDCDR-S---YNEGCDGGLMDYAFEFVIKNGGI------DTEEDYPYKERNGV-C 113 5
KVDEISRRLIWEKNLKYISI-H----NLEASLGVHTYELAMNHLGDMT------SEEVVQKMTGLKVP-L 97 0
NEEG-WRRAVWEKNMKMIEL-H----NQEYREGKHSFTMAMNAFGDMT------SEEFRQVMNGFQ---- 96 2
NEEE-WRRAIWEKNMRMIQL-H----NGEYSNGQHGFSMEMNAFGDMT------NEEFRQVVNGYR---- 96 3
IVTG-NLLELSEQELVDCDK-H----SYGCKGGYQTTSLQYVANNGVH------TSKV-YPYQAKQYK-C 95 13
LKTG-KLVSLSAQNLVDCST-AKYG-NKGCNGGFMTEAFQYIIDNNGI------DSEASYPYKAMDGK-C 99 4
RTKG-KLVSLSEQNLVDCSR-PE-G-NQGCNGGLMDQAFQYVQDNGGI------DSEESYPYTAKDDEDC 99 1
IRTG-NLNEYSEQELLDCDR-R----SYGCNGGYPWSALQLVAQYG-I------HYRNTYPYEGVQRY-C 174 15
IKTG-NLVELSEQELVDCDK-Q----SYGCNRGYQSTSLQYVAQNG-I------HLRAKYPYIAKQQT-C 173 14
IKTN-KLVSLSEQELVDCDKEE----NQGCNGGLMESAFEFIKQKGGI------TTESNYPYTAQEGT-C 178 11
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K---PSIKN--KVFIDSISILKGND------------VVNKS-LVISPTVV----GIAVTKELKLYS-GG 159 9
NQCLV------KEEASSAVVGGPGP------------TPEPT----TTTTT----SAPGPSPSYFVQ-MS 156 10
N---V------TTGKCGIAMMASYP------------TKSGA----NPPKP----SPTPPTPPTPPP-PS 153 12
S---L------LGRVHFIGDVKPNE---------LIMALNYV----GPVTI----AVGASEDFVLYS-GG 163 8
K---R------KVSLSSIGAVKENQ---------LILALNEV----GPLSV----NVGVNNDFVAYS-EG 171 6
K---N------KVTLSSVGGVKENE---------LIRALNEV----GPVSV----NVGVTDDFSFYG-GG 168 7
D---QYRKNAKVVKIDSYEDVPVNNE---KALQK---AVAHQ----PVSIA----LEAGGRDFQHYK-SG 165 5
S---HSRSNDTLYIPEWEGRAPDSVDYRKKGYVT---PVKNQ----GQCGSCWAFSSVGALEGQLKKKTG 157 0
N---RKPRKGKVFQEPLFYEAPRSVDWREKGYVT---PVKNQ----GQCGSCWAFSATGALEGQMFRKTG 156 2
H---QKHKKGRLFQEPLMLKIPKSVDWREKGCVT---PVKNQ----GQCGSCWAFSASGCLEGQMFLKTG 156 3
R---ATDKPGPKVKITGYKRVPSNCE---TSFLG---ALANQ----PLSVL----VEAGGKPFQLYK-SG 147 13
Q---YDVKNRA-ATCSRYIELPFGSE---EALKE---AVANKG---PVSVG----IDASHSSFFLYK-TG 151 4
R---YKAEYNA-ANDTGFVDIPQGHE---RALMK---AVASVG---PVSVA----IDAGHSSFQFYQ-SG 151 1
R---SREKGPYAAKTDGVRQVQPYNE---GALLY---SIANQ----PVSVV----LEAAGKDFQLYR-GG 226 15
R---ANQVGGPKVKTNGVGRVQSNNE---GSLLN---AIAHQ----PVSVV----VESAGRDFQNYK-GG 225 14
D---ESKVNDLAVSIDGHENVPVNDE---NALLK---AVANQ----PVSVA----IDAGGSDFQFYS-EG 230 11
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I-FTGKC-GGELNHAVLL--VGEGVD-H--ETG-----------------MR------------------ 187 9
C-TDAAC-IVGCENVTLP--TGQCLL-T--TSG-----------------VSAIVTCGAETLTEEVFLTS 202 10
A-PDHVC-DDNFSCPAGS--TCCCAF-G--FRN-----------------LCLVWGCCPVE-------GA 192 12
V-FDGEC-NPELNHSVLL--VGYGQV-K--KSL-----------------AFEDSHSNVDS-------NL 202 8
V-YNGTC-SEELNHSVLL--VGYGQV-E--KTK-----------------L----NYNNKI-------Q- 205 6
I-FNGTC-TEELNHSVLL--VGYGQV-Q--SSK-----------------IFQEKNAYDDA-------S- 206 7
I-FTGKC-GTAVDHGVVI--AGYGTE-N--GMDYWIVRNSWGANCRENGYLRVQRNVSSSS-------GL 221 5
K-LLNLS-PQNLVDCVSE--NDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN-------PT 215 0
R-LISLS-EQNLVDCSGPQGNEGCNG-GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-------PK 216 2
K-LISLS-EQNLVDCSHAQGNQGCNG-GLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYR-------AE 216 3
V-FDGPC-GTKLDHAVTA--VGYGTS-D--GKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQ-------GT 203 13
VYYDPSC-TQNVNHGVLV--VGYGNL-D--GKDYWLVKNSWGLHFGDQGYIRMARNSGNHC-------GI 208 4
IYYEPDCSSEDLDHGVLV--VGYGFE-G--GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHC-------GI 209 1
I-FVGPC-GNKVDHAVAA--VGYGPN-------YILIKNSWGTGWGENGYIRIKRGTGNSY-------GV 278 15
I-FEGSC-GTKVDHAVTA--VGYGKS-G--GKGYILIKNSWGPGWGENGYIRIRRASGNSP-------GV 281 14
V-FTGDC-NTDLNHGVAI--VGYGTTVD--GTNYWIVRNSWGPEWGEQGYIRMQRNISKKE-------GL 287 11
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---------------------------------------------------------------------- 187 9
---------------------------------------------------------------------- 202 10
---------------------------------------------------------------------- 192 12
---------------------------------------------------------------------- 202 8
---------------------------------------------------------------------- 205 6
---------------------------------------------------------------------- 206 7
CGLAIEPSYPVKTGPN-------PPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCP 284 5
GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI 285 0
YSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGF 285 2
FAVANDTGFVDIPQQ-EKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGY 285 3
CGVYKSSYYP------------------------------------------------------------ 213 13
------ANYP------------------------------------------------------------ 212 4
------ATAA------------------------------------------------------------ 213 1
CGLYTSSFYPVKN--------------------------------------------------------- 291 15
CGVYRSSYYPIKN--------------------------------------------------------- 294 14
CGIAMMASYPIKNSSD------------------------------------------------------ 303 11
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----------------------------------YWIIKNSWGEDWGENGFLRLQRTKKGLDKCGILTFG 223 9
---------THCSGP---SVRSSV-----PLNKCNRLLRGSVEFFCGSSSSGRLA-DVDRQR--RHQPYH 252 10
---------TCCKDH---ASCCPP-----DYPVCN-----TRAGTCSASKNSPLS-VKALKR--TLAKLN 237 12
--------IKKYKEN---IKGDDD-----DDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDD--GFCGVG 254 8
---------TYNTKE---NSNQPD-----DNIIYYWIIKNSWSKKWGENGFMRLSRNKNGDN--VFCGIG 256 6
---------GVTKKGALSYPSKAD-----DGIQYYWIIKNSWSKFWGENGFMRISRNKEGDN--VFCGIG 260 7
LEG----A-TCCEDH---YSCCPH-----DYPICNV--RQGTCSMSKGNPLGVKAMKRILAQ--PIGAFG 337 5
QKG----N-KHWIIK---NSWGENWGNKGYILMARN--KNNACGIANL---------------------- 323 0
ESTESDNN-KYWLVK---NSWGEEWGMGGYVKMAKD--RRNHCGIASA---------------------- 327 2
EGTDSNKN-KYWLVK---NSWGSEWGMEGYIKIAKD--RDNHCGLATA---------------------- 327 3
-----------------------------------------------F---------------------- 214 13
-----------------------------------------------S---------------------- 213 4
-----------------------------------------------S---------------------- 214 1
---------------------------------------------------------------------- 291 15
---------------------------------------------------------------------- 294 14
---------------------------------------NPTGSLSSP---------------------- 312 11
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LNPILYSS--- 231 9
SR--HRRL--- 258 10
THELIDNM--- 245 12
SDVFFPIY--- 262 8
EEVFYPIL--- 264 6
VEVFYPIL--- 268 7
NGGKKSSS--- 345 5
----ASFPKM- 329 0
----ASYPTV- 333 2
----ASYPVVN 334 3
----KGFA--- 218 13
----YPEI--- 217 4
----YPLV--- 218 1
----------- 291 15
----------- 294 14
----KDEL--- 316 11
number of completely conserved sites: 0